Overview | Installation | Using seedr | physiodata, a way of storing germination data | Bradford's hydrotime model | Garcia-Huidobro's thermal time model | The physiotime() function | Getting help | References
Package: seedr 0.3.0.9000
seedr: Hydro and Thermal Time Seed Germination Models in R
Analysis of seed germination data using the physiological time modelling approach. Includes functions to fit hydrotime and thermal-time models with the traditional approaches of Bradford (1990) <doi:10.1104/pp.94.2.840> and Garcia-Huidobro (1982) <doi:10.1093/jxb/33.2.288>. Allows to fit models to grouped datasets, i.e. datasets containing multiple species, seedlots or experiments.
Authors:
seedr_0.3.0.9000.tar.gz
seedr_0.3.0.9000.zip(r-4.7)seedr_0.3.0.9000.zip(r-4.6)seedr_0.3.0.9000.zip(r-4.5)
seedr_0.3.0.9000.tgz(r-4.6-any)seedr_0.3.0.9000.tgz(r-4.5-any)
seedr_0.3.0.9000.tar.gz(r-4.7-any)seedr_0.3.0.9000.tar.gz(r-4.6-any)
seedr_0.3.0.9000.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
seedr/json (API)
| # Install 'seedr' in R: |
| install.packages('seedr', repos = c('https://efernandezpascual.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/efernandezpascual/seedr/issues
agronomybotanyecologygerminationseeds
Last updated from:103281e89b. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 115 | ||
| source / vignettes | OK | 205 | ||
| linux-release-x86_64 | OK | 115 | ||
| macos-release-arm64 | OK | 124 | ||
| macos-oldrel-arm64 | OK | 142 | ||
| windows-devel | OK | 89 | ||
| windows-release | OK | 67 | ||
| windows-oldrel | OK | 72 | ||
| wasm-release | OK | 113 |
Exports:bradfordhuidobrophysiodataphysiotime
Dependencies:binomdata.table
seedr: Hydro and Thermal Time Seed Germination Models in R
Last update: 2020-10-25
Started: 2020-10-25
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Fits Bradford's hydrotime model | bradford |
| Temperature example dataset | centaury |
| Water potential example dataset | grasses |
| Fits Garcia-Huidobro's thermal time model | huidobro |
| Transforms dataset to physiodata format | physiodata |
| Fits physiological time seed germination models | physiotime |
| seedr: Hydro and Thermal Time Seed Germination Models in R | seedr |
